Gene sequences

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SNP Detection
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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015912682.1_cds_XP_016462766.1_55956
CDS Infomation	[gene=LOC107785888] [db_xref=GeneID:107785888] [protein=pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like] [protein_id=XP_016462766.1] [location=complement(39209..41731)] [gbkey=CDS]
Sequence	ATGGCTTCACTGCCCATTAACTCCAATATAAACCCACACACCCTTACCCTTAAACCCAAA ACATCTCTCAACTTCCCCCACACTCATTTCATAACTTACCAAGAAGATGGCAGAAACGAT AAACTTCTCCATAAATCTTACTTCAAACGCATTGGGTCTCTATGCAAAGAAGGTCAACTT CAAGAAGCTGCGGACCTTCTCAACGAAATGGAGTACCGAAATCTGTACGTTGGACCTGAG TTCTATGGTGAACTCCTCCAAGGCTGTGTGTACGAGCGAGACCTTCAATTGGGCCAGCAA ATTCATTCAAAGATTCTGAAGAGTGGTGATTTCTTTGCCAAGAATGAGTACATTGAGACA AAGCTTGTGATTTTCTACGCAAAGTGTGATGCTTTTGATGTTTCCAACCATCTGTTTTGC AGACTAAGAAAACAGAATGTGTTTTCTTGGGCTGCAATTATTGGACTAAGTTGCAGGATG AATTTGTCAGAAGAAGCTTTGTGGAGATTCGTTGAAATGCTAGAAAATGGCGTTTTAGGC GACAATTTTGTTCTCCCAAATGTTCTGAAAGCTTGTGGTGCCCTAAATTTTGTTGATTTT GGGAAATGTGTTCATGGGCATGTCTGTAAATTAGGTTTTGAAGGTTGTGTATTTGTAGCG AGTAGTCTCATTGATATGTATGGAAAATGTGGGGTTTTGACTGATGCAAGAAAGGTTTTT GATTGTATGGTTGAAAGAAATGTAGTGGCCTGGAACTCAATAATTGTGAGTTATATGCAA AATGGATACAATGAGGAAGCTATTGGAGTCTTCTATGATATGAGGACCGAAGGAATTGAA CCAACTCGTGTAACTCTGTCAAGCCTTCTTTCAGCTTCAGCCAACTTATGTGCTTTGGAA GAAGGTAAGCAAGCGCATGCTATATCTATTCTTAGTGGATTAGATTTAGATAAGATTTTG GGGAGTTCTCTTATAAACTTTTATGCTAAAGTTGGTTTGGTTGATAATGCTGAGCTAATA TTTGATAGGCTGATTGAGAGAGATGTGGTAACATGGAACTTGTTAATGTCTTGTTATTTT CATTCTGGTCGGATTGACAAGGCTCTCAGCTTGTCTTGTTTGATGAGATTGAAAGGCTTT AGCTTTGACTCTGTGACACTGTCATCAATATTATCCGCCTCAGCAGATTTAAGGAATTTA AATCTTGGCAAAGAGGGGCACTGTTTTTGTATCAGACACAATTTTGATAAGGATGTAGTT GTAGCTAGTGGTATTATAAATATGTATGCCAAATGTGAGAAAATCCTTGATGCAAGACGG GTTTTTGACTATACCAAAGAGAAAGATGTAATTTTGTGGAATACATTATTGGCTGCTTAT GCAGAAGGGGGTTTGAGTGGTGAGTCGTTAAGATTGTTTTACCAGATGCAGCTCTATGGT CTACCGCAAAATACCATATCTTGGAATTCCGTAATTCTTGGTTTCTTAAGAAATGGACAG ATAAATGAGGCCATAGACATGTTTTCACAAATGAAAGCTGTTGGTTTAGACCCTAATATA GTTACTTATACTACTCTTATCAGTGGTCTATCTCGAAATGGTTACAGTAGTGAGGCCCTT ACATATTTTAAAAAACTGCTTCAAGCAGGGTATCGACCAAATAGTGCAAGTATCGTTGCT TCCCTCTCAGCTTCTATAAATATAGCATCACTGAACGATGGAAGAGCCATTCATGGATAC ATTTTAAGGCAAAAGATTCCATTATCTCTTCCAGTGGCAACTTCATTAGTTGATATGTAT GCTAAATGCGGAAATCTAAAATGTGCAAAATGCATTTTTAATCTGATCCCAGAAAAGGAG TTACCCTTGTATAATGCTATGATATCTGGTTATGCTTTACATGGATGTGCTGTAGAAGCT CTTGCATTGTTCAAATGTCTATGCAAGGGAGGCGTGGAACCAGACAGCATAACCTTCACT AGTGTCCTATCCTCTTGTTGTCATGCTGGACTGGTAAAAGAAGGTTTAGCTGTTCTTTAT GACATGGTCTCTTTGTATAATATGAAGCCAAGTTTGGAACATTATGGTTGTATGATCAGT CTTCTCTCTAGGTGCGGTGATCTCTATGAAGCTATGCAGCTCATTCAGAAGATGCCTTTC AAACCTGATGCAAATGTTTTCGAATCACTACTTGTGGCTTGTAGAGAACTCAGAGAGACA CAACTCGAGGAACATATAGCTAATTTTTTGATTAAGATGGAACCAGATAATTCAGGGCAC TATGTCTCACTTTCAAATGCATATGCAACAACTGGAAGATGGGATGAAGTCTCAAAACTA AGGGATTTGATGAAAAAAAAGGGTCTTAGGAAAAGACCTGGATGCAGTTGGATTCAAGTT GGAACAGAGTTTCATATGTTTGTTTCAGGAGACAGGTGGCATTCACACATACAGGAAATA AGTACAATATTGGCTTTGCTGGATAGGGAAATGCAGCTTACTAGACTCTCTTTCGACAGC TGA

Peptide Sequence

PEP ID	XP_016462766.1
PEP Infomation	PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like [Nicotiana tabacum]
Sequence	MASLPINSNINPHTLTLKPKTSLNFPHTHFITYQEDGRNDKLLHKSYFKRIGSLCKEGQL QEAADLLNEMEYRNLYVGPEFYGELLQGCVYERDLQLGQQIHSKILKSGDFFAKNEYIET KLVIFYAKCDAFDVSNHLFCRLRKQNVFSWAAIIGLSCRMNLSEEALWRFVEMLENGVLG DNFVLPNVLKACGALNFVDFGKCVHGHVCKLGFEGCVFVASSLIDMYGKCGVLTDARKVF DCMVERNVVAWNSIIVSYMQNGYNEEAIGVFYDMRTEGIEPTRVTLSSLLSASANLCALE EGKQAHAISILSGLDLDKILGSSLINFYAKVGLVDNAELIFDRLIERDVVTWNLLMSCYF HSGRIDKALSLSCLMRLKGFSFDSVTLSSILSASADLRNLNLGKEGHCFCIRHNFDKDVV VASGIINMYAKCEKILDARRVFDYTKEKDVILWNTLLAAYAEGGLSGESLRLFYQMQLYG LPQNTISWNSVILGFLRNGQINEAIDMFSQMKAVGLDPNIVTYTTLISGLSRNGYSSEAL TYFKKLLQAGYRPNSASIVASLSASINIASLNDGRAIHGYILRQKIPLSLPVATSLVDMY AKCGNLKCAKCIFNLIPEKELPLYNAMISGYALHGCAVEALALFKCLCKGGVEPDSITFT SVLSSCCHAGLVKEGLAVLYDMVSLYNMKPSLEHYGCMISLLSRCGDLYEAMQLIQKMPF KPDANVFESLLVACRELRETQLEEHIANFLIKMEPDNSGHYVSLSNAYATTGRWDEVSKL RDLMKKKGLRKRPGCSWIQVGTEFHMFVSGDRWHSHIQEISTILALLDREMQLTRLSFDS

Transcript Sequence

Gene sequence data has not been registered.